SMIM28

Across TCGA cell cohorts, SMIM28 RNA expression is significantly associated with the RNA expression of many other genes, with 1,387 significant associations in total. LUNG_SCLC shows the largest number of these associations.

The most reproducible SMIM28-associated genes across cancer lineages are BPIFA2, TBC1D28, and OR1B1. Each is linked with SMIM28 in more than 2 cancer types. Because this analysis shows association rather than direction, both SMIM28-to-partner and partner-to-SMIM28 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, SMIM28 versus BPIFA2 in LUNG_NSCLC_LUSC, with a Pearson correlation of 0.93.

RNA expression associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (SMIM28→partner) and Y-score (partner→SMIM28) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
LUNG_NSCLC_LUSC	BPIFA2 →	+1.213	+0.028	<.001	<.001	3	3
PANCREAS	TBC1D28 →	+0.204	+0.010	<.001	<.001	3	3
STOMACH	OR1B1 →	+0.043	+0.023	.004	.003	3	2
LIVER	RETN →	+0.105	+0.077	<.001	.008	3	2
LUNG_NSCLC_LUSC	CEACAM3 →	+0.126	+0.024	<.001	.001	3	2
LUNG_NSCLC_LUSC	COL6A5 →	+0.022	+0.030	<.001	<.001	3	2

Each partner links to its Q-omics profile. Showing the 6 strongest of 1,387 associations by consensus.

SMIM28 vs BPIFA2 — LUNG_NSCLC_LUSC

Explore this scatter interactively →