SMIM2-IT1

Across TCGA patient cohorts, SMIM2-IT1 RNA expression is significantly associated with the RNA expression of many other genes, with 11,158 significant associations in total. THYM shows the largest number of these associations.

The most reproducible SMIM2-IT1-associated genes across cancer lineages are SMIM2-AS1, SMIM2, and LINC00390. Each is linked with SMIM2-IT1 in more than 24 cancer types. Because this analysis shows association rather than direction, both SMIM2-IT1-to-partner and partner-to-SMIM2-IT1 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, SMIM2-IT1 versus SMIM2-AS1 in READ, with a Pearson correlation of 0.45.

RNA expression associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (SMIM2-IT1→partner) and Y-score (partner→SMIM2-IT1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
READ	SMIM2-AS1 →	+1.163	+0.132	<.001	<.001	3	25
THYM	SMIM2 →	+0.893	+0.661	<.001	<.001	3	25
THYM	LINC00390 →	+1.352	+0.705	<.001	<.001	3	24
THCA	TSC22D1 →	+1.528	+0.322	<.001	<.001	3	17
THYM	CASZ1 →	+0.892	+0.620	<.001	<.001	3	11
THYM	ROCK2 →	+0.739	+0.565	<.001	<.001	3	11

Each partner links to its Q-omics profile. Showing the 6 strongest of 11,158 associations by consensus.

SMIM2-IT1 vs SMIM2-AS1 — READ

Explore this scatter interactively →