SMIM2-IT1

Across TCGA patient cohorts, SMIM2-IT1 RNA expression is significantly associated with the go_rna of many other GO terms, with 7,008 significant associations in total. KIRC shows the largest number of these associations.

The most reproducible SMIM2-IT1-associated GO terms across cancer lineages are Dendrite development, Dendrite morphogenesis, and Cellular response to steroid hormone stimulus. Each is linked with SMIM2-IT1 in more than 12 cancer types. Because this analysis shows association rather than direction, both SMIM2-IT1-to-partner and partner-to-SMIM2-IT1 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Dendrite development grouped by SMIM2-IT1-low versus SMIM2-IT1-high in THYM.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (SMIM2-IT1→partner) and Y-score (partner→SMIM2-IT1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
THYM	Dendrite development →	+0.037	+0.863	<.001	<.001	3	13
THYM	Dendrite morphogenesis →	+0.037	+0.926	<.001	<.001	3	12
THYM	Cellular response to steroid hormone stimulus →	+0.050	+0.892	<.001	<.001	3	12
THYM	Protein localization to vacuole →	+0.068	+0.916	<.001	<.001	3	12
THYM	Establishment of protein localization to vacuole →	+0.073	+1.061	<.001	<.001	3	12
THYM	Postsynapse organization →	+0.034	+0.893	<.001	<.001	3	12

Each partner links to its Q-omics profile. Showing the 6 strongest of 7,008 associations by consensus.

Dendrite development by SMIM2-IT1 expression — THYM

Explore this box plot interactively →