SMIM10L2A

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, SMIM10L2A mutation is significantly associated with the RNA expression of many other genes, with 15 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible SMIM10L2A-associated genes across cancer lineages are MIR5191, OR2M4, and MAGEB10. Each is linked with SMIM10L2A in more than 1 cancer types. Because this analysis shows association rather than direction, both SMIM10L2A-to-partner and partner-to-SMIM10L2A results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, MIR5191 grouped by SMIM10L2A-low versus SMIM10L2A-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (SMIM10L2A→partner) and Y-score (partner→SMIM10L2A) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECMIR5191 →+0.357+4.226<.001.00831
UCECOR2M4 →+0.121+4.561.009<.00131
UCECMAGEB10 →+0.208+3.741<.001.00331
UCECEIF1AY →+0.038+3.789<.001.00231
UCECRNU6-1292P →+0.394+4.453<.001.00631
UCECRPS29P31 →+0.476+4.715.001<.00131
Each partner links to its Q-omics profile. Showing the 6 strongest of 15 associations by consensus.

MIR5191 by SMIM10L2A expression — UCEC

Box plot of MIR5191 in SMIM10L2A-low vs SMIM10L2A-high samples in UCEC.

Explore this box plot interactively →

Exploration