SLIRP

mutation — cross-omics
Cross-omicsMUTATION → IMMUNEPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, SLIRP mutation is significantly associated with the immune_cell of many other genes, with 1 significant associations in total. STAD shows the largest number of these associations.

The most reproducible SLIRP-associated genes across cancer lineages are MPP. Each is linked with SLIRP in more than 1 cancer types. Because this analysis shows association rather than direction, both SLIRP-to-partner and partner-to-SLIRP results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, MPP grouped by SLIRP-low versus SLIRP-high in STAD.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (SLIRP→partner) and Y-score (partner→SLIRP) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
STADMPP →+0.032+2.809<.001.04031
Each partner links to its Q-omics profile. Showing the 1 strongest of 1 associations by consensus.

MPP by SLIRP expression — STAD

Box plot of MPP in SLIRP-low vs SLIRP-high samples in STAD.

Explore this box plot interactively →

Exploration