SLC5A6

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, SLC5A6 protein abundance is significantly associated with the RNA expression of many other genes, with 13,158 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible SLC5A6-associated genes across cancer lineages are PANK1, GRAP2, and PPM1G. Each is linked with SLC5A6 in more than 4 cancer types. Because this analysis shows association rather than direction, both SLC5A6-to-partner and partner-to-SLC5A6 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, SLC5A6 versus PANK1 in HNSC, with a Pearson correlation of 0.34.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (SLC5A6→partner) and Y-score (partner→SLC5A6) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
HNSCPANK1 →+0.702+0.540<.001.00135
OVGRAP2 →-0.562-0.464.001.00134
HNSCPPM1G →+0.545+0.387.005<.00134
UCECTRAV38-2DV8 →-0.791-0.385.003.00234
COADTNFSF12 →-0.544-0.632.003.00134
OVMLF2 →+0.635+0.606<.001<.00134
Each partner links to its Q-omics profile. Showing the 6 strongest of 13,158 associations by consensus.

SLC5A6 vs PANK1 — HNSC

Per-sample scatter of SLC5A6 vs PANK1 in HNSC (Pearson r = 0.34).

Explore this scatter interactively →

Exploration