SLC5A6

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, SLC5A6 mutation is significantly associated with the RNA expression of many other genes, with 1,287 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible SLC5A6-associated genes across cancer lineages are COX18, AKIP1, and SPR. Each is linked with SLC5A6 in more than 3 cancer types. Because this analysis shows association rather than direction, both SLC5A6-to-partner and partner-to-SLC5A6 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, COX18 grouped by SLC5A6-low versus SLC5A6-high in STAD.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (SLC5A6→partner) and Y-score (partner→SLC5A6) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
STADCOX18 →+0.475+3.371.002.00433
UCECAKIP1 →+0.610+3.711<.001<.00133
UCECSPR →+0.719+3.470<.001.00233
UCECEIF2S1 →+0.549+3.032.003<.00133
UCECCCT7 →+0.443+2.343.003.00333
STADALG10 →+0.484+3.270.006.00824
Each partner links to its Q-omics profile. Showing the 6 strongest of 1,287 associations by consensus.

COX18 by SLC5A6 expression — STAD

Box plot of COX18 in SLC5A6-low vs SLC5A6-high samples in STAD.

Explore this box plot interactively →

Exploration