SLC4A1AP

mutation — cross-omics
Cross-omicsMUTATION → RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, SLC4A1AP mutation is significantly associated with the RNA expression of many other genes, with 15 significant associations in total. LUNG_SCLC shows the largest number of these associations.

The most reproducible SLC4A1AP-associated genes across cancer lineages are CRYBB1, LMX1A, and GIMD1. Each is linked with SLC4A1AP in more than 1 cancer types. Because this analysis shows association rather than direction, both SLC4A1AP-to-partner and partner-to-SLC4A1AP results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, CRYBB1 grouped by SLC4A1AP-low versus SLC4A1AP-high in OVARY.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (SLC4A1AP→partner) and Y-score (partner→SLC4A1AP) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
OVARYCRYBB1 →+0.060+4.029<.001.00931
BLOOD_LeukemiaLMX1A →+0.159+4.409<.001.00531
BLOOD_LeukemiaGIMD1 →+0.039+4.152<.001.00931
LARGE_INTESTINEACSM6 →+0.020+3.584<.001.00231
LARGE_INTESTINETAFA1 →+0.206+3.425.004<.00131
LARGE_INTESTINECHSY3 →+0.361+3.252.007.00931
Each partner links to its Q-omics profile. Showing the 6 strongest of 15 associations by consensus.

CRYBB1 by SLC4A1AP expression — OVARY

Box plot of CRYBB1 in SLC4A1AP-low vs SLC4A1AP-high samples in OVARY.

Explore this box plot interactively →

Exploration