SLC49A3

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, SLC49A3 mutation is significantly associated with the RNA expression of many other genes, with 553 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible SLC49A3-associated genes across cancer lineages are MTND6P17, MIR4672, and MIR4325. Each is linked with SLC49A3 in more than 2 cancer types. Because this analysis shows association rather than direction, both SLC49A3-to-partner and partner-to-SLC49A3 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, MTND6P17 grouped by SLC49A3-low versus SLC49A3-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (SLC49A3→partner) and Y-score (partner→SLC49A3) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECMTND6P17 →+0.218+4.736<.001.00333
UCECMIR4672 →+0.659+2.626<.001.00632
UCECMIR4325 →+0.308+4.245<.001.00632
UCECRN7SL248P →+0.197+5.137<.001<.00132
UCECMIR8053 →+0.578+4.359<.001<.00132
LUSCSLC9B1P2 →+0.154+3.554.002.00432
Each partner links to its Q-omics profile. Showing the 6 strongest of 553 associations by consensus.

MTND6P17 by SLC49A3 expression — UCEC

Box plot of MTND6P17 in SLC49A3-low vs SLC49A3-high samples in UCEC.

Explore this box plot interactively →

Exploration