SLC46A2

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, SLC46A2 RNA expression is significantly associated with the protein abundance of many other proteins, with 13,804 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible SLC46A2-associated proteins across cancer lineages are SNX30, PHYHD1, and PIP4K2A. Each is linked with SLC46A2 in more than 5 cancer types. Because this analysis shows association rather than direction, both SLC46A2-to-partner and partner-to-SLC46A2 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, SLC46A2 versus SNX30 in OV, with a Pearson correlation of 0.53.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (SLC46A2→partner) and Y-score (partner→SLC46A2) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
OVSNX30 →+0.438+0.751<.001.00136
BRCAPHYHD1 →+0.568+0.247<.001<.00135
GBMPIP4K2A →+0.413+0.360.003.00235
OVELAC2 →-0.294-0.397.003.00935
LSCCRFC4 →-0.362-0.560<.001<.00134
UCECSERPINA5 →+0.924+0.946<.001.00234
Each partner links to its Q-omics profile. Showing the 6 strongest of 13,804 associations by consensus.

SLC46A2 vs SNX30 — OV

Per-sample scatter of SLC46A2 vs SNX30 in OV (Pearson r = 0.53).

Explore this scatter interactively →

Exploration