SLC38A5

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, SLC38A5 protein abundance is significantly associated with the RNA expression of many other genes, with 7,102 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible SLC38A5-associated genes across cancer lineages are RNF43, BABAM2, and METTL27. Each is linked with SLC38A5 in more than 2 cancer types. Because this analysis shows association rather than direction, both SLC38A5-to-partner and partner-to-SLC38A5 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, SLC38A5 versus RNF43 in HNSC, with a Pearson correlation of -0.37.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (SLC38A5→partner) and Y-score (partner→SLC38A5) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
HNSCRNF43 →-0.499-0.509.007.00933
LSCCBABAM2 →-0.377-0.813.006<.00133
LUADMETTL27 →-1.491-0.763<.001<.00133
LSCCZBTB18 →-0.789-0.731.005.00433
HNSCTLCD5 →-0.683-0.864.004.00233
LUADSMIM29 →-0.579-0.669<.001<.00133
Each partner links to its Q-omics profile. Showing the 6 strongest of 7,102 associations by consensus.

SLC38A5 vs RNF43 — HNSC

Per-sample scatter of SLC38A5 vs RNF43 in HNSC (Pearson r = -0.37).

Explore this scatter interactively →

Exploration