SLC35E3

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, SLC35E3 RNA expression is significantly associated with the protein abundance of many other proteins, with 13,506 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible SLC35E3-associated proteins across cancer lineages are SMARCC2, TBC1D15, and UPP1. Each is linked with SLC35E3 in more than 4 cancer types. Because this analysis shows association rather than direction, both SLC35E3-to-partner and partner-to-SLC35E3 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, SLC35E3 versus SMARCC2 in HNSC, with a Pearson correlation of 0.32.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (SLC35E3→partner) and Y-score (partner→SLC35E3) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
HNSCSMARCC2 →+0.220+0.464.001.00135
LSCCTBC1D15 →+0.233+0.408.001<.00135
HNSCUPP1 →-0.894-0.465<.001.00434
HNSCVEZF1 →+0.496+0.687<.001<.00134
LSCCBPTF →+0.254+0.462<.001<.00134
BRCATRIM21_S266 →-0.532-0.576.002.00134
Each partner links to its Q-omics profile. Showing the 6 strongest of 13,506 associations by consensus.

SLC35E3 vs SMARCC2 — HNSC

Per-sample scatter of SLC35E3 vs SMARCC2 in HNSC (Pearson r = 0.32).

Explore this scatter interactively →

Exploration