SLC30A7

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, SLC30A7 mutation is significantly associated with the RNA expression of many other genes, with 2,256 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible SLC30A7-associated genes across cancer lineages are MIR551B, OR2T12, and H3P46. Each is linked with SLC30A7 in more than 1 cancer types. Because this analysis shows association rather than direction, both SLC30A7-to-partner and partner-to-SLC30A7 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, MIR551B grouped by SLC30A7-low versus SLC30A7-high in BRCA.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (SLC30A7→partner) and Y-score (partner→SLC30A7) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BRCAMIR551B →+0.276+7.731<.001.00932
BLCAOR2T12 →+0.034+7.640.002.00932
BRCAH3P46 →+0.193+7.731<.001.00931
HNSCVCY →+0.099+7.954<.001.00831
HNSCRNU1-15P →+0.323+7.954<.001.00831
HNSCSNORD115-29 →+0.497+7.954<.001.00831
Each partner links to its Q-omics profile. Showing the 6 strongest of 2,256 associations by consensus.

MIR551B by SLC30A7 expression — BRCA

Box plot of MIR551B in SLC30A7-low vs SLC30A7-high samples in BRCA.

Explore this box plot interactively →

Exploration