SLC24A1

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, SLC24A1 protein abundance is significantly associated with the RNA expression of many other genes, with 107 significant associations in total. HNSC shows the largest number of these associations.

The most reproducible SLC24A1-associated genes across cancer lineages are PRSS33, CKM, and CCL24. Each is linked with SLC24A1 in more than 1 cancer types. Because this analysis shows association rather than direction, both SLC24A1-to-partner and partner-to-SLC24A1 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, SLC24A1 versus PRSS33 in HNSC, with a Pearson correlation of 0.45.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (SLC24A1→partner) and Y-score (partner→SLC24A1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
HNSCPRSS33 →+0.343+0.975.005.00531
HNSCCKM →+2.951+0.598.006.00431
HNSCCCL24 →+2.247+0.798<.001.00731
HNSCSMYD1 →+1.530+0.790.006.00231
HNSCMYOT →+1.671+0.637.001.00231
HNSCLRRC39 →+1.201+0.802<.001<.00131
Each partner links to its Q-omics profile. Showing the 6 strongest of 107 associations by consensus.

SLC24A1 vs PRSS33 — HNSC

Per-sample scatter of SLC24A1 vs PRSS33 in HNSC (Pearson r = 0.45).

Explore this scatter interactively →

Exploration