SLC22A16

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, SLC22A16 mutation is significantly associated with the RNA expression of many other genes, with 1,925 significant associations in total. SKCM shows the largest number of these associations.

The most reproducible SLC22A16-associated genes across cancer lineages are MIR3920, RNA5SP183, and TMEM38B. Each is linked with SLC22A16 in more than 2 cancer types. Because this analysis shows association rather than direction, both SLC22A16-to-partner and partner-to-SLC22A16 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, MIR3920 grouped by SLC22A16-low versus SLC22A16-high in BRCA.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (SLC22A16→partner) and Y-score (partner→SLC22A16) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BRCAMIR3920 →+0.858+3.915<.001.00233
STADRNA5SP183 →+0.399+4.981.001.00233
UCECTMEM38B →+0.656+2.098.002.00333
UCECELP5 →+0.385+2.617.003<.00133
UCECPSMC3IP →+0.541+2.724.003.00333
UCECMED10 →+0.422+2.330.002.00333
Each partner links to its Q-omics profile. Showing the 6 strongest of 1,925 associations by consensus.

MIR3920 by SLC22A16 expression — BRCA

Box plot of MIR3920 in SLC22A16-low vs SLC22A16-high samples in BRCA.

Explore this box plot interactively →

Exploration