SLC1A4

RNA expression — cross-omics
Cross-omicsRNA → RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, SLC1A4 RNA expression is significantly associated with the RNA expression of many other genes, with 8,414 significant associations in total. BLOOD_Leukemia shows the largest number of these associations.

The most reproducible SLC1A4-associated genes across cancer lineages are CEBPG, ADM2, and GFPT1. Each is linked with SLC1A4 in more than 9 cancer types. Because this analysis shows association rather than direction, both SLC1A4-to-partner and partner-to-SLC1A4 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, SLC1A4 versus CEBPG in LUNG_NSCLC_LUSC, with a Pearson correlation of 0.59.

RNA expression associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (SLC1A4→partner) and Y-score (partner→SLC1A4) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LUNG_NSCLC_LUSCCEBPG →+1.407+1.644<.001.004310
OESOPHAGUSADM2 →+1.942+2.314.001<.00138
LARGE_INTESTINEGFPT1 →+1.056+1.460<.001<.00138
OVARYTRIB3 →+1.826+1.227<.001<.00138
OESOPHAGUSSLC7A1 →+1.798+1.770<.001<.00137
SOFT_TISSUESLC6A9 →+1.773+1.143<.001.00137
Each partner links to its Q-omics profile. Showing the 6 strongest of 8,414 associations by consensus.

SLC1A4 vs CEBPG — LUNG_NSCLC_LUSC

Per-sample scatter of SLC1A4 vs CEBPG in LUNG_NSCLC_LUSC (Pearson r = 0.59).

Explore this scatter interactively →

Exploration