SLC19A3

mutation — cross-omics
Cross-omicsMUTATION → RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, SLC19A3 mutation is significantly associated with the RNA expression of many other genes, with 11 significant associations in total. BLOOD_Leukemia shows the largest number of these associations.

The most reproducible SLC19A3-associated genes across cancer lineages are DCLK3, TACR3, and OR1N2. Each is linked with SLC19A3 in more than 1 cancer types. Because this analysis shows association rather than direction, both SLC19A3-to-partner and partner-to-SLC19A3 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, DCLK3 grouped by SLC19A3-low versus SLC19A3-high in BLOOD_Leukemia.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (SLC19A3→partner) and Y-score (partner→SLC19A3) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BLOOD_LeukemiaDCLK3 →+0.155+3.769.005.00831
BLOOD_LeukemiaTACR3 →+0.028+4.060<.001.00331
BLOOD_LeukemiaOR1N2 →+0.018+3.705.008.00731
BLOOD_LeukemiaSOX1 →+0.723+4.149<.001.00831
BLOOD_LeukemiaFIGLA →+0.022+4.984<.001.00231
BLOOD_LeukemiaKHDC3L →+0.205+3.774<.001.00831
Each partner links to its Q-omics profile. Showing the 6 strongest of 11 associations by consensus.

DCLK3 by SLC19A3 expression — BLOOD_Leukemia

Box plot of DCLK3 in SLC19A3-low vs SLC19A3-high samples in BLOOD_Leukemia.

Explore this box plot interactively →

Exploration