SLC17A6

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, SLC17A6 protein abundance is significantly associated with the RNA expression of many other genes, with 10,924 significant associations in total. GBM shows the largest number of these associations.

The most reproducible SLC17A6-associated genes across cancer lineages are YPEL1, SNRPD3, and PRODH. Each is linked with SLC17A6 in more than 1 cancer types. Because this analysis shows association rather than direction, both SLC17A6-to-partner and partner-to-SLC17A6 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, SLC17A6 versus YPEL1 in GBM, with a Pearson correlation of 0.41.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (SLC17A6→partner) and Y-score (partner→SLC17A6) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
GBMYPEL1 →+0.494+0.761<.001<.00131
GBMSNRPD3 →+0.414+0.848<.001<.00131
GBMPRODH →+0.917+1.001<.001<.00131
GBMGRK3 →+0.662+1.159<.001<.00131
GBMSEZ6L →+1.577+1.012<.001<.00131
GBMLGALS1 →-0.730-0.906.001.00531
Each partner links to its Q-omics profile. Showing the 6 strongest of 10,924 associations by consensus.

SLC17A6 vs YPEL1 — GBM

Per-sample scatter of SLC17A6 vs YPEL1 in GBM (Pearson r = 0.41).

Explore this scatter interactively →

Exploration