SLC13A2

mutation — cross-omics
Cross-omicsMUTATION → RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, SLC13A2 mutation is significantly associated with the RNA expression of many other genes, with 10 significant associations in total. SKIN shows the largest number of these associations.

The most reproducible SLC13A2-associated genes across cancer lineages are OR6F1, OR2T12, and ASPN. Each is linked with SLC13A2 in more than 1 cancer types. Because this analysis shows association rather than direction, both SLC13A2-to-partner and partner-to-SLC13A2 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, OR6F1 grouped by SLC13A2-low versus SLC13A2-high in BLOOD_Lymphoma.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (SLC13A2→partner) and Y-score (partner→SLC13A2) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BLOOD_LymphomaOR6F1 →+0.139+4.643<.001.00531
BLOOD_LymphomaOR2T12 →+0.009+4.643<.001.00531
LARGE_INTESTINEASPN →+0.037+3.648.002.00231
BLOOD_LeukemiaGNGT1 →+0.060+4.551<.001.00431
BLOOD_LeukemiaKRTAP6-3 →+0.187+5.569<.001.00131
SKINOR5A1 →+0.008+3.700<.001.00931
Each partner links to its Q-omics profile. Showing the 6 strongest of 10 associations by consensus.

OR6F1 by SLC13A2 expression — BLOOD_Lymphoma

Box plot of OR6F1 in SLC13A2-low vs SLC13A2-high samples in BLOOD_Lymphoma.

Explore this box plot interactively →

Exploration