SKAP1-AS1

associated omics data
SKAP1 antisense RNA 1Genealiases: []

Q-omics provides the consensus-scored SKAP1-AS1 profile across patient tissues and cancer cell-line models. SKAP1-AS1 expression is associated with patient survival in 20 of 34 cancer types, with the highest sampling consensus in KIRC. Among the 18 cancer types available for tumor–normal comparison, SKAP1-AS1 is differentially expressed in 8, with the highest sampling consensus in CHOL. Additionally, SKAP1-AS1 RNA expression shows 12,883 significant gene co-expression associations, with the highest sampling consensus in THYM. Together, these results highlight KIRC, CHOL, and THYM as cancer lineages where SKAP1-AS1 shows reproducible signals across survival, tumor–normal expression, and patient cross-omics analyses.

Every result is evaluated using two consensus scores. Sampling consensus measures how consistently a finding is reproduced within a cancer lineage across different conditions. Lineage consensus measures how broadly the result is shared across cancer types, distinguishing pan-cancer signals from lineage-specific patterns.

Survival associations

This table summarizes SKAP1-AS1 survival associations across molecular data types. SKAP1-AS1 RNA expression shows survival associations in the most cancer types (20). The rightmost column indicates the cancer type with the highest sampling consensus for each molecular layer.
SKAP1-AS1 data typeSurvival analysisLineage consensusLineage of highest sampling consensus
RNAKaplan–Meier20KIRC (132)view →
This table ranks reproducible SKAP1-AS1 RNA expression–survival associations across cancer types. High SKAP1-AS1 expression shows unfavorable associations in KIRC, ACC and DLBC, but favorable associations in BLCA, LUSC and BRCA. The KIRC Kaplan–Meier curve shows clear separation, with the high-expression group declining faster, consistent with the unfavorable association (log-rank p < 0.001). Together, the overview and detailed table identify KIRC as the clearest survival context for SKAP1-AS1 RNA expression.
LineageMeasureSplitStageAUC1
high
AUC2
low
pSampling consensus
KIRCDFSMedianAll0.5240.707<.001132view →
ACCOSTertileIII,IV0.2550.762<.00180view →
BLCAOSQuartileAll0.5560.280.00237view →
DLBCDFSTertileAll0.3270.893.00135view →
LUSCDFSTertileIII,IV0.7820.432.00234view →
BRCADFSMedianAll0.5750.480.00428view →
Pink = unfavorable, green = favorable. all 20 lineages →

SKAP1-AS1-KIRC (DFS)

Kaplan–Meier survival curve for SKAP1-AS1 RNA expression in KIRC: high vs low expression groups.

Explore this curve interactively →

Tumor vs Normal expression

This table summarizes SKAP1-AS1 tumor–normal expression differences by data type. RNA shows broader differences across cancer types, with a lineage consensus of 8. The strongest signals are observed in CHOL for RNA.
SKAP1-AS1 data typeExpression analysisLineage consensusLineage of highest sampling consensus
RNABox plot8CHOL (5)view →
This table ranks reproducible tumor–normal expression differences for SKAP1-AS1. A negative fold-change indicates higher expression in normal tissue than in tumor tissue. SKAP1-AS1 shows lower tumor expression in KICH and higher tumor expression in CHOL, COAD, BRCA, STAD and READ. The CHOL box plot shows higher SKAP1-AS1 RNA expression in tumor versus normal tissue (log2 FC = +0.203, t-test p = .001).
LineageGenderStageFold-changepSampling consensus
CHOLAllAll+0.203.0015view →
COADAllII,III,IV+0.139.0035view →
BRCAAllAll+0.129.0144view →
STADAllAll+0.488.0023view →
READFemaleAll+0.438.0182view →
KICHFemaleAll−0.169.0042view →
Green = repressed in tumor. all 8 lineages →

SKAP1-AS1-CHOL

Tumor-vs-normal expression box plot for SKAP1-AS1 in CHOL.

Explore this plot interactively →

Cross-omics associations

This table shows molecular features associated with SKAP1-AS1 in patient tissues and cancer cell lines. In patient samples, SKAP1-AS1 shows the broadest associations at the RNA and protein expression levels, with THYM recurring as the lineage with the largest associated feature set.
Associated data typeStrength (# associated data)Lineage of highest associated data
RNA
RNA12,883THYM (4688)view →
Protein (mass-spec)10,563HNSC (4179)view →