SH3BP1

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, SH3BP1 mutation is significantly associated with the RNA expression of many other genes, with 964 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible SH3BP1-associated genes across cancer lineages are SYPL1P1, RNA5SP116, and RN7SL255P. Each is linked with SH3BP1 in more than 2 cancer types. Because this analysis shows association rather than direction, both SH3BP1-to-partner and partner-to-SH3BP1 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, SYPL1P1 grouped by SH3BP1-low versus SH3BP1-high in BLCA.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (SH3BP1→partner) and Y-score (partner→SH3BP1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BLCASYPL1P1 →+0.154+3.628<.001.00633
UCECRNA5SP116 →+0.174+4.253<.001.00433
BLCARN7SL255P →+0.359+4.049<.001.00332
CESCRPS29P22 →+0.250+3.654<.001<.00132
CESCTGFB3-AS1 →+0.273+3.736<.001.00232
BLCABNIP3P20 →+0.116+3.266.009.00932
Each partner links to its Q-omics profile. Showing the 6 strongest of 964 associations by consensus.

SYPL1P1 by SH3BP1 expression — BLCA

Box plot of SYPL1P1 in SH3BP1-low vs SH3BP1-high samples in BLCA.

Explore this box plot interactively →

Exploration