SGSM3-AS1

Across TCGA patient cohorts, SGSM3-AS1 RNA expression is significantly associated with the RNA expression of many other genes, with 15,257 significant associations in total. UVM shows the largest number of these associations.

The most reproducible SGSM3-AS1-associated genes across cancer lineages are ZNF587, SLC25A25-AS1, and CICP14. Each is linked with SGSM3-AS1 in more than 26 cancer types. Because this analysis shows association rather than direction, both SGSM3-AS1-to-partner and partner-to-SGSM3-AS1 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, SGSM3-AS1 versus ZNF587 in UVM, with a Pearson correlation of 0.49.

RNA expression associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (SGSM3-AS1→partner) and Y-score (partner→SGSM3-AS1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
UVM	ZNF587 →	+0.846	+0.081	<.001	<.001	3	27
ESCA	SLC25A25-AS1 →	+1.178	+0.359	<.001	<.001	3	26
TGCT	CICP14 →	+1.221	+0.238	<.001	<.001	3	26
UVM	HM13-IT1 →	+0.929	+0.091	<.001	<.001	3	26
UVM	CEP95 →	+0.988	+0.083	<.001	<.001	3	26
LAML	CTAGE7P →	+0.611	+0.693	<.001	<.001	3	26

Each partner links to its Q-omics profile. Showing the 6 strongest of 15,257 associations by consensus.

SGSM3-AS1 vs ZNF587 — UVM

Explore this scatter interactively →