SETD4-AS1

Across TCGA patient cohorts, SETD4-AS1 RNA expression is significantly associated with the go_rna of many other GO terms, with 6,440 significant associations in total. STAD shows the largest number of these associations.

The most reproducible SETD4-AS1-associated GO terms across cancer lineages are mRNA 3'-end processing, DNA-templated transcription initiation, and Golgi organization. Each is linked with SETD4-AS1 in more than 15 cancer types. Because this analysis shows association rather than direction, both SETD4-AS1-to-partner and partner-to-SETD4-AS1 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, mRNA 3'-end processing grouped by SETD4-AS1-low versus SETD4-AS1-high in TGCT.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (SETD4-AS1→partner) and Y-score (partner→SETD4-AS1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
TGCT	mRNA 3'-end processing →	+0.043	+0.199	<.001	<.001	3	16
STAD	DNA-templated transcription initiation →	+0.038	+0.119	<.001	<.001	3	16
STAD	Golgi organization →	+0.039	+0.103	<.001	<.001	3	16
UVM	Rescue of stalled ribosome →	+0.045	+0.146	<.001	.001	3	15
STAD	Obsolete mRNA methylation →	+0.060	+0.166	<.001	<.001	3	15
STAD	Cytosolic transport →	+0.065	+0.233	<.001	<.001	3	15

Each partner links to its Q-omics profile. Showing the 6 strongest of 6,440 associations by consensus.

mRNA 3'-end processing by SETD4-AS1 expression — TGCT

Explore this box plot interactively →