SEPTIN4-AS1

Across TCGA patient cohorts, SEPTIN4-AS1 RNA expression is significantly associated with the go_rna of many other GO terms, with 7,143 significant associations in total. KIRC shows the largest number of these associations.

The most reproducible SEPTIN4-AS1-associated GO terms across cancer lineages are Endoplasmic reticulum to Golgi vesicle-mediated transport, Nucleotide-sugar metabolic process, and Golgi vesicle transport. Each is linked with SEPTIN4-AS1 in more than 26 cancer types. Because this analysis shows association rather than direction, both SEPTIN4-AS1-to-partner and partner-to-SEPTIN4-AS1 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Endoplasmic reticulum to Golgi vesicle-mediated transport grouped by SEPTIN4-AS1-low versus SEPTIN4-AS1-high in ESCA.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (SEPTIN4-AS1→partner) and Y-score (partner→SEPTIN4-AS1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
ESCA	Endoplasmic reticulum to Golgi vesicle-mediated transport →	+0.073	+0.290	<.001	<.001	3	27
DLBC	Nucleotide-sugar metabolic process →	+0.058	+0.282	<.001	<.001	3	26
DLBC	Golgi vesicle transport →	+0.073	+0.372	<.001	<.001	3	26
STAD	Response to endoplasmic reticulum stress →	+0.060	+0.205	<.001	<.001	3	25
ESCA	Regulation of ubiquitin-dependent protein catabolic process →	+0.057	+0.208	.001	<.001	3	25
ESCA	Peptidyl-lysine modification →	+0.068	+0.260	.001	<.001	3	24

Each partner links to its Q-omics profile. Showing the 6 strongest of 7,143 associations by consensus.

Endoplasmic reticulum to Golgi vesicle-mediated transport by SEPTIN4-AS1 expression — ESCA

Explore this box plot interactively →