SCUBE1-AS2

Across TCGA patient cohorts, SCUBE1-AS2 RNA expression is significantly associated with the go_rna of many other GO terms, with 6,879 significant associations in total. STAD shows the largest number of these associations.

The most reproducible SCUBE1-AS2-associated GO terms across cancer lineages are Protein folding, Negative regulation of mRNA processing, and ATP metabolic process. Each is linked with SCUBE1-AS2 in more than 16 cancer types. Because this analysis shows association rather than direction, both SCUBE1-AS2-to-partner and partner-to-SCUBE1-AS2 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Protein folding grouped by SCUBE1-AS2-low versus SCUBE1-AS2-high in ESCA.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (SCUBE1-AS2→partner) and Y-score (partner→SCUBE1-AS2) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
ESCA	Protein folding →	+0.059	+0.173	<.001	<.001	3	17
KIRP	Negative regulation of mRNA processing →	+0.066	+0.041	<.001	<.001	3	15
STAD	ATP metabolic process →	+0.050	+0.105	<.001	<.001	2	14
ESCA	Respiratory system development →	+0.037	+0.103	<.001	<.001	3	13
ESCA	Protein deacetylation →	+0.045	+0.148	<.001	.002	2	14
ESCA	Retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum →	+0.061	+0.134	<.001	.003	3	13

Each partner links to its Q-omics profile. Showing the 6 strongest of 6,879 associations by consensus.

Protein folding by SCUBE1-AS2 expression — ESCA

Explore this box plot interactively →