SCP2D1

Across TCGA patient cohorts, SCP2D1 protein abundance is significantly associated with the RNA expression of many other genes, with 3,508 significant associations in total. BRCA shows the largest number of these associations.

The most reproducible SCP2D1-associated genes across cancer lineages are SAR1AP3, GK-IT1, and RN7SL277P. Each is linked with SCP2D1 in more than 1 cancer types. Because this analysis shows association rather than direction, both SCP2D1-to-partner and partner-to-SCP2D1 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, SCP2D1 versus SAR1AP3 in BRCA, with a Pearson correlation of 0.30.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (SCP2D1→partner) and Y-score (partner→SCP2D1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
BRCA	SAR1AP3 →	+0.427	+0.473	.002	.002	3	2
LSCC	GK-IT1 →	+1.231	+0.574	.001	.005	3	2
GBM	RN7SL277P →	-1.256	-0.909	.004	.004	3	2
BRCA	RN7SL834P →	-0.996	-0.460	.007	.005	3	2
BRCA	MYBBP1A →	+0.810	+0.500	<.001	.001	3	2
BRCA	RPUSD3 →	+0.809	+0.733	<.001	<.001	3	2

Each partner links to its Q-omics profile. Showing the 6 strongest of 3,508 associations by consensus.

SCP2D1 vs SAR1AP3 — BRCA

Explore this scatter interactively →