SCNN1D

mutation — cross-omics
Cross-omicsMUTATION → RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, SCNN1D mutation is significantly associated with the RNA expression of many other genes, with 26 significant associations in total. BLOOD_Leukemia shows the largest number of these associations.

The most reproducible SCNN1D-associated genes across cancer lineages are OR6C70, ACTRT1, and C20orf85. Each is linked with SCNN1D in more than 1 cancer types. Because this analysis shows association rather than direction, both SCNN1D-to-partner and partner-to-SCNN1D results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, OR6C70 grouped by SCNN1D-low versus SCNN1D-high in SKIN.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (SCNN1D→partner) and Y-score (partner→SCNN1D) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
SKINOR6C70 →+0.066+4.217<.001.00132
BLOOD_LeukemiaACTRT1 →+0.014+4.786.004<.00131
BLOOD_LeukemiaC20orf85 →+0.018+4.384.001.00631
BLOOD_LeukemiaKRT84 →+0.437+4.567<.001.00131
BLOOD_LeukemiaSCGB3A2 →+0.098+4.507<.001.00131
BLOOD_LeukemiaCST2 →+0.397+4.567<.001.00131
Each partner links to its Q-omics profile. Showing the 6 strongest of 26 associations by consensus.

OR6C70 by SCNN1D expression — SKIN

Box plot of OR6C70 in SCNN1D-low vs SCNN1D-high samples in SKIN.

Explore this box plot interactively →

Exploration