SCNN1B

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, SCNN1B mutation is significantly associated with the RNA expression of many other genes, with 2,417 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible SCNN1B-associated genes across cancer lineages are CDCA2, SKA1, and PBK. Each is linked with SCNN1B in more than 2 cancer types. Because this analysis shows association rather than direction, both SCNN1B-to-partner and partner-to-SCNN1B results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, CDCA2 grouped by SCNN1B-low versus SCNN1B-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (SCNN1B→partner) and Y-score (partner→SCNN1B) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECCDCA2 →+0.831+3.016<.001<.00133
UCECSKA1 →+0.680+2.258<.001.00133
UCECPBK →+0.945+3.700<.001.00133
SKCMNDUFA4P2 →+0.047+2.230.006.00233
UCECRNA5SP411 →+0.914+2.015<.001.00132
BRCAOR5AM1P →+0.056+6.586<.001<.00132
Each partner links to its Q-omics profile. Showing the 6 strongest of 2,417 associations by consensus.

CDCA2 by SCNN1B expression — UCEC

Box plot of CDCA2 in SCNN1B-low vs SCNN1B-high samples in UCEC.

Explore this box plot interactively →

Exploration