SCN4A

Across TCGA cell cohorts, SCN4A RNA expression is significantly associated with the RNA expression of many other genes, with 6,725 significant associations in total. BLOOD_Lymphoma shows the largest number of these associations.

The most reproducible SCN4A-associated genes across cancer lineages are CD19, MBTD1, and STRBP. Each is linked with SCN4A in more than 4 cancer types. Because this analysis shows association rather than direction, both SCN4A-to-partner and partner-to-SCN4A results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, SCN4A versus CD19 in BLOOD_Lymphoma, with a Pearson correlation of 0.57.

RNA expression associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (SCN4A→partner) and Y-score (partner→SCN4A) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
BLOOD_Lymphoma	CD19 →	+4.934	+1.010	<.001	<.001	3	5
BLOOD_Lymphoma	MBTD1 →	+0.923	+0.668	<.001	<.001	3	4
BLOOD_Lymphoma	STRBP →	+2.273	+0.900	<.001	<.001	3	4
BLOOD_Lymphoma	CDK14 →	+2.946	+0.719	<.001	<.001	3	4
BONE	C10orf105 →	+0.196	+0.846	<.001	<.001	2	4
BONE	MEX3A →	+2.158	+0.547	<.001	.002	3	3

Each partner links to its Q-omics profile. Showing the 6 strongest of 6,725 associations by consensus.

SCN4A vs CD19 — BLOOD_Lymphoma

Explore this scatter interactively →