SCLT1

Across TCGA cell cohorts, SCLT1 protein abundance is significantly associated with the RNA expression of many other genes, with 2,073 significant associations in total. LUNG_SCLC shows the largest number of these associations.

The most reproducible SCLT1-associated genes across cancer lineages are ALPK1, LGR4, and TM7SF3. Each is linked with SCLT1 in more than 5 cancer types. Because this analysis shows association rather than direction, both SCLT1-to-partner and partner-to-SCLT1 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, SCLT1 versus ALPK1 in OESOPHAGUS, with a Pearson correlation of -0.54.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (SCLT1→partner) and Y-score (partner→SCLT1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
OESOPHAGUS	ALPK1 →	-1.069	-1.137	.005	.005	3	6
OESOPHAGUS	LGR4 →	-1.799	-1.516	.001	<.001	3	5
LUNG_SCLC	TM7SF3 →	-0.675	-0.649	.009	.002	3	4
STOMACH	SRGAP1 →	-1.348	-1.195	.002	.002	3	4
BLOOD_Myeloma	SMAP1 →	-0.779	-0.734	.001	.009	3	4
BLOOD_Myeloma	TONSL →	+1.592	+0.952	.005	.002	3	4

Each partner links to its Q-omics profile. Showing the 6 strongest of 2,073 associations by consensus.

SCLT1 vs ALPK1 — OESOPHAGUS

Explore this scatter interactively →