SCARNA14

Across TCGA patient cohorts, SCARNA14 RNA expression is significantly associated with the go_rna of many other GO terms, with 6,232 significant associations in total. STAD shows the largest number of these associations.

The most reproducible SCARNA14-associated GO terms across cancer lineages are RNA modification, Regulation of double-strand break repair, and Microtubule organizing center organization. Each is linked with SCARNA14 in more than 17 cancer types. Because this analysis shows association rather than direction, both SCARNA14-to-partner and partner-to-SCARNA14 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, RNA modification grouped by SCARNA14-low versus SCARNA14-high in STAD.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (SCARNA14→partner) and Y-score (partner→SCARNA14) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
STAD	RNA modification →	+0.044	+0.375	<.001	<.001	3	18
STAD	Regulation of double-strand break repair →	+0.047	+0.408	<.001	<.001	3	17
STAD	Microtubule organizing center organization →	+0.048	+0.376	<.001	<.001	3	17
STAD	U2-type prespliceosome assembly →	+0.067	+0.435	<.001	<.001	3	16
STAD	Regulation of mRNA splicing, via spliceosome →	+0.057	+0.393	<.001	<.001	3	16
STAD	Telomere maintenance →	+0.054	+0.440	<.001	<.001	3	16

Each partner links to its Q-omics profile. Showing the 6 strongest of 6,232 associations by consensus.

RNA modification by SCARNA14 expression — STAD

Explore this box plot interactively →