SALL3

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, SALL3 RNA expression is significantly associated with the protein abundance of many other proteins, with 7,636 significant associations in total. GBM shows the largest number of these associations.

The most reproducible SALL3-associated proteins across cancer lineages are STEAP3, TNKS1BP1_S1073, and MYEF2. Each is linked with SALL3 in more than 2 cancer types. Because this analysis shows association rather than direction, both SALL3-to-partner and partner-to-SALL3 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, SALL3 versus STEAP3 in GBM, with a Pearson correlation of -0.32.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (SALL3→partner) and Y-score (partner→SALL3) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
GBMSTEAP3 →-0.394-0.827<.001.00233
LSCCTNKS1BP1_S1073 →-0.437-0.582.001.00433
LSCCMYEF2 →+0.595+0.636.002.00333
LSCCZNF318_S709 →+0.420+0.714.007.00433
LSCCASL →-0.419-0.747<.001<.00132
LSCCATN1_S645 →+0.380+0.731<.001.00132
Each partner links to its Q-omics profile. Showing the 6 strongest of 7,636 associations by consensus.

SALL3 vs STEAP3 — GBM

Per-sample scatter of SALL3 vs STEAP3 in GBM (Pearson r = -0.32).

Explore this scatter interactively →

Exploration