RTN4RL1

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RTN4RL1 protein abundance is significantly associated with the RNA expression of many other genes, with 526 significant associations in total. GBM shows the largest number of these associations.

The most reproducible RTN4RL1-associated genes across cancer lineages are SEPTIN4, OR13C5, and TAP1. Each is linked with RTN4RL1 in more than 1 cancer types. Because this analysis shows association rather than direction, both RTN4RL1-to-partner and partner-to-RTN4RL1 results are reported.

Each partner links to its own Q-omics profile.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (RTN4RL1→partner) and Y-score (partner→RTN4RL1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
GBMSEPTIN4 →+1.449+1.382.001<.00132
GBMOR13C5 →+0.381+1.076.002.00532
BRCATAP1 →-1.184-0.650.003.00931
BRCASPACA5 →+0.363+1.062<.001.00331
BRCAESRRA →-0.795-0.708.009.00431
BRCAC14orf28 →+0.576+0.676<.001.00631
Each partner links to its Q-omics profile. Showing the 6 strongest of 526 associations by consensus.

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