RTL1

Across TCGA patient cohorts, RTL1 protein abundance is significantly associated with the RNA expression of many other genes, with 287 significant associations in total. GBM shows the largest number of these associations.

The most reproducible RTL1-associated genes across cancer lineages are OR51A4, LINC01707, and GAPDHP74. Each is linked with RTL1 in more than 1 cancer types. Because this analysis shows association rather than direction, both RTL1-to-partner and partner-to-RTL1 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, RTL1 versus OR51A4 in LUAD, with a Pearson correlation of 0.76.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (RTL1→partner) and Y-score (partner→RTL1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
LUAD	OR51A4 →	+0.053	+2.134	<.001	<.001	3	1
LUAD	LINC01707 →	+0.229	+2.255	.001	<.001	3	1
LUAD	GAPDHP74 →	+0.184	+1.577	.001	.006	3	1
LUAD	ZNF317P1 →	+0.163	+1.121	.003	.007	3	1
LUAD	COPS8P1 →	+0.488	+2.014	.007	.007	3	1
GBM	EEF1A2 →	+2.371	+1.674	.007	<.001	3	1

Each partner links to its Q-omics profile. Showing the 6 strongest of 287 associations by consensus.

RTL1 vs OR51A4 — LUAD

Explore this scatter interactively →