RPP38

Across TCGA patient cohorts, RPP38 RNA expression is significantly associated with the protein abundance of many other proteins, with 13,664 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible RPP38-associated proteins across cancer lineages are NUDT5, LARP4B, and UPF2. Each is linked with RPP38 in more than 8 cancer types. Because this analysis shows association rather than direction, both RPP38-to-partner and partner-to-RPP38 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, RPP38 versus NUDT5 in OV, with a Pearson correlation of 0.40.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (RPP38→partner) and Y-score (partner→RPP38) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner protein	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
OV	NUDT5 →	+0.450	+0.273	.003	.002	3	9
GBM	LARP4B →	+0.292	+0.364	<.001	<.001	3	8
LSCC	UPF2 →	+0.252	+0.448	<.001	<.001	3	8
BRCA	RNF20 →	+0.293	+0.604	<.001	<.001	3	7
GBM	RNF40 →	+0.301	+0.394	<.001	<.001	3	7
OV	HSPA14 →	+0.366	+0.596	<.001	<.001	3	7

Each partner links to its Q-omics profile. Showing the 6 strongest of 13,664 associations by consensus.

RPP38 vs NUDT5 — OV

Explore this scatter interactively →