RP9P

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RP9P mutation is significantly associated with the RNA expression of many other genes, with 6 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible RP9P-associated genes across cancer lineages are AQP7P4, MTCO1P56, and RNU6-1133P. Each is linked with RP9P in more than 1 cancer types. Because this analysis shows association rather than direction, both RP9P-to-partner and partner-to-RP9P results are reported.

Each partner links to its own Q-omics profile.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (RP9P→partner) and Y-score (partner→RP9P) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECAQP7P4 →+0.158+6.027<.001.00231
UCECMTCO1P56 →+0.281+5.420<.001.00531
UCECRNU6-1133P →+0.720+5.242<.001.00731
UCECLINC00265-2P →+0.089+5.031<.001.00931
UCECMLLT10P2 →+0.289+5.242.001.00731
UCECMTND4P7 →+0.433+5.621.004.00431
Each partner links to its Q-omics profile. Showing the 6 strongest of 6 associations by consensus.

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