RNU6-9

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RNU6-9 RNA expression is significantly associated with the protein abundance of many other proteins, with 5,559 significant associations in total. GBM shows the largest number of these associations.

The most reproducible RNU6-9-associated proteins across cancer lineages are DOP1B, HDGFL3, and PTMS. Each is linked with RNU6-9 in more than 2 cancer types. Because this analysis shows association rather than direction, both RNU6-9-to-partner and partner-to-RNU6-9 results are reported.

Each partner links to its own Q-omics profile.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (RNU6-9→partner) and Y-score (partner→RNU6-9) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
CCRCCDOP1B →-0.284-0.610<.001<.00133
GBMHDGFL3 →+0.323+0.502<.001.00133
GBMPTMS →+0.373+0.696.002.00133
LSCCPTDSS2_S24 →+0.423+1.243<.001<.00132
GBMARID3A_S119 →-0.509-0.826.002<.00132
HNSCZNF185 →-0.468-0.812<.001<.00132
Each partner links to its Q-omics profile. Showing the 6 strongest of 5,559 associations by consensus.

Exploration