RNU6-89P

Across TCGA patient cohorts, RNU6-89P RNA expression is significantly associated with the go_rna of many other GO terms, with 6,028 significant associations in total. STAD shows the largest number of these associations.

The most reproducible RNU6-89P-associated GO terms across cancer lineages are Negative regulation of organelle assembly, Positive regulation of double-strand break repair, and Positive regulation of amide metabolic process. Each is linked with RNU6-89P in more than 8 cancer types. Because this analysis shows association rather than direction, both RNU6-89P-to-partner and partner-to-RNU6-89P results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Negative regulation of organelle assembly grouped by RNU6-89P-low versus RNU6-89P-high in LUSC.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (RNU6-89P→partner) and Y-score (partner→RNU6-89P) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
LUSC	Negative regulation of organelle assembly →	+0.094	+0.046	<.001	.001	3	8
STAD	Positive regulation of double-strand break repair →	+0.072	+0.279	<.001	<.001	3	8
STAD	Positive regulation of amide metabolic process →	+0.078	+0.336	<.001	<.001	3	8
STAD	Negative regulation of gene expression, epigenetic →	+0.078	+0.321	<.001	<.001	3	8
STAD	Positive regulation of DNA metabolic process →	+0.077	+0.324	<.001	<.001	3	8
LUSC	Nuclear export →	+0.132	+0.032	<.001	.002	3	8

Each partner links to its Q-omics profile. Showing the 6 strongest of 6,028 associations by consensus.

Negative regulation of organelle assembly by RNU6-89P expression — LUSC

Explore this box plot interactively →