RNU6-39P

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RNU6-39P RNA expression is significantly associated with the protein abundance of many other proteins, with 6,165 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible RNU6-39P-associated proteins across cancer lineages are HIC1_S704, NES, and EPN3_S449. Each is linked with RNU6-39P in more than 3 cancer types. Because this analysis shows association rather than direction, both RNU6-39P-to-partner and partner-to-RNU6-39P results are reported.

Each partner links to its own Q-omics profile.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (RNU6-39P→partner) and Y-score (partner→RNU6-39P) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LSCCHIC1_S704 →+0.570+0.650<.001<.00134
CCRCCNES →+0.465+0.677<.001<.00134
OVEPN3_S449 →-1.588-0.554<.001<.00133
CCRCCARHGEF17_S43 →+0.972+0.692.001.00433
LUADMTERF4 →-0.382-0.578<.001.00333
CCRCCCDH5 →+0.313+0.577<.001<.00133
Each partner links to its Q-omics profile. Showing the 6 strongest of 6,165 associations by consensus.

Exploration