RNU6-1262P

RNA expression — cross-omics
Cross-omicsRNA → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RNU6-1262P RNA expression is significantly associated with the RNA expression of many other genes, with 15,399 significant associations in total. UVM shows the largest number of these associations.

The most reproducible RNU6-1262P-associated genes across cancer lineages are PPWD1, ERVK13-1, and CICP14. Each is linked with RNU6-1262P in more than 32 cancer types. Because this analysis shows association rather than direction, both RNU6-1262P-to-partner and partner-to-RNU6-1262P results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, RNU6-1262P versus PPWD1 in UVM, with a Pearson correlation of 0.54.

RNA expression associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (RNU6-1262P→partner) and Y-score (partner→RNU6-1262P) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UVMPPWD1 →+1.099+0.487<.001<.001333
UVMERVK13-1 →+0.736+0.433<.001<.001332
DLBCCICP14 →+1.309+1.078<.001<.001332
UVMTRMT13 →+1.019+0.463<.001<.001332
UVMZNF780B →+0.898+0.458<.001<.001332
DLBCMIR1285-1 →+1.270+1.040<.001<.001332
Each partner links to its Q-omics profile. Showing the 6 strongest of 15,399 associations by consensus.

RNU6-1262P vs PPWD1 — UVM

Per-sample scatter of RNU6-1262P vs PPWD1 in UVM (Pearson r = 0.54).

Explore this scatter interactively →

Exploration