RNU4-54P

Across TCGA patient cohorts, RNU4-54P RNA expression is significantly associated with the go_rna of many other GO terms, with 5,791 significant associations in total. STAD shows the largest number of these associations.

The most reproducible RNU4-54P-associated GO terms across cancer lineages are Signal transduction by p53 class mediator, Osteoblast differentiation, and Biological process involved in interaction with symbiont. Each is linked with RNU4-54P in more than 8 cancer types. Because this analysis shows association rather than direction, both RNU4-54P-to-partner and partner-to-RNU4-54P results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Signal transduction by p53 class mediator grouped by RNU4-54P-low versus RNU4-54P-high in COAD.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (RNU4-54P→partner) and Y-score (partner→RNU4-54P) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
COAD	Signal transduction by p53 class mediator →	+0.094	+0.215	<.001	<.001	3	9
COAD	Osteoblast differentiation →	+0.081	+0.146	<.001	<.001	3	8
COAD	Biological process involved in interaction with symbiont →	+0.088	+0.185	<.001	<.001	3	8
COAD	Cellular response to oxygen levels →	+0.108	+0.310	<.001	<.001	3	8
COAD	Iron ion transport →	+0.076	+0.268	<.001	.002	3	8
COAD	Vesicle budding from membrane →	+0.114	+0.135	<.001	<.001	3	8

Each partner links to its Q-omics profile. Showing the 6 strongest of 5,791 associations by consensus.

Signal transduction by p53 class mediator by RNU4-54P expression — COAD

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