RNU4-28P

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RNU4-28P RNA expression is significantly associated with the protein abundance of many other proteins, with 5,661 significant associations in total. GBM shows the largest number of these associations.

The most reproducible RNU4-28P-associated proteins across cancer lineages are TLN1_T2270, PRKG1, and PTCD3. Each is linked with RNU4-28P in more than 3 cancer types. Because this analysis shows association rather than direction, both RNU4-28P-to-partner and partner-to-RNU4-28P results are reported.

Each partner links to its own Q-omics profile.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (RNU4-28P→partner) and Y-score (partner→RNU4-28P) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
HNSCTLN1_T2270 →+0.559+0.459.008.00724
HNSCPRKG1 →+0.292+0.736.002.00833
LUADPTCD3 →-0.204-0.474<.001.00133
GBMSEPTIN2 →+0.153+0.537.003<.00133
HNSCELMO2 →+0.217+0.670<.001.00133
LSCCHIC1_S237 →+0.436+0.498<.001<.00133
Each partner links to its Q-omics profile. Showing the 6 strongest of 5,661 associations by consensus.

Exploration