RNU4-1

associated omics data
RNA, U4 small nuclear 1Genealiases: RNU4A · RNU4B2 · U4 · U4BL

Q-omics provides the consensus-scored RNU4-1 profile across patient tissues and cancer cell-line models. RNU4-1 expression is associated with patient survival in 20 of 34 cancer types, with the highest sampling consensus in COAD. Among the 18 cancer types available for tumor–normal comparison, RNU4-1 is differentially expressed in 8, with the highest sampling consensus in THCA. Additionally, RNU4-1 RNA expression shows 11,522 significant gene co-expression associations, with the highest sampling consensus in THYM. Together, these results highlight COAD, THCA, and THYM as cancer lineages where RNU4-1 shows reproducible signals across survival, tumor–normal expression, and patient cross-omics analyses.

Every result is evaluated using two consensus scores. Sampling consensus measures how consistently a finding is reproduced within a cancer lineage across different conditions. Lineage consensus measures how broadly the result is shared across cancer types, distinguishing pan-cancer signals from lineage-specific patterns.

Survival associations

This table summarizes RNU4-1 survival associations across molecular data types. RNU4-1 RNA expression shows survival associations in the most cancer types (20). The rightmost column indicates the cancer type with the highest sampling consensus for each molecular layer.
RNU4-1 data typeSurvival analysisLineage consensusLineage of highest sampling consensus
RNAKaplan–Meier20COAD (29)view →
This table ranks reproducible RNU4-1 RNA expression–survival associations across cancer types. High RNU4-1 expression shows unfavorable associations in KIRC, OV and LGG, but favorable associations in COAD, STAD and MESO. The COAD Kaplan–Meier curve shows clear separation, with the low-expression group declining faster, consistent with the favorable association (log-rank p = .002). Together, the overview and detailed table identify COAD as the clearest survival context for RNU4-1 RNA expression.
LineageMeasureSplitStageAUC1
high
AUC2
low
pSampling consensus
COADOSMedianIII,IV0.6710.407.00229view →
KIRCDFSTertileAll0.4890.747.00320view →
STADDFSTertileIII,IV0.5590.352.00319view →
OVOSQuartileAll0.5980.719.00916view →
MESODFSMedianAll0.5980.293.0379view →
LGGDFSQuartileAll0.7880.877.0159view →
Pink = unfavorable, green = favorable. all 20 lineages →

RNU4-1-COAD (OS)

Kaplan–Meier survival curve for RNU4-1 RNA expression in COAD: high vs low expression groups.

Explore this curve interactively →

Tumor vs Normal expression

This table summarizes RNU4-1 tumor–normal expression differences by data type. RNA shows broader differences across cancer types, with a lineage consensus of 8. The strongest signals are observed in THCA for RNA.
RNU4-1 data typeExpression analysisLineage consensusLineage of highest sampling consensus
RNABox plot8THCA (11)view →
This table ranks reproducible tumor–normal expression differences for RNU4-1. A negative fold-change indicates higher expression in normal tissue than in tumor tissue. RNU4-1 shows lower tumor expression in THCA, KIRC, KICH and READ and higher tumor expression in UCEC and COAD. The THCA box plot shows higher RNU4-1 RNA expression in normal versus tumor tissue (log2 FC = −2.876, t-test p < 0.001).
LineageGenderStageFold-changepSampling consensus
THCAMaleIV−2.876<.00111view →
UCECAllAll+1.243<.0016view →
KIRCMaleIII,IV−0.686.0056view →
COADAllAll+1.101.0094view →
KICHAllII,III,IV−1.022.0014view →
READAllIII,IV−0.595.0382view →
Green = repressed in tumor. all 8 lineages →

RNU4-1-THCA

Tumor-vs-normal expression box plot for RNU4-1 in THCA.

Explore this plot interactively →

Cross-omics associations

This table shows molecular features associated with RNU4-1 in patient tissues and cancer cell lines. In patient samples, RNU4-1 shows the broadest associations at the RNA and protein expression levels, with THYM recurring as the lineage with the largest associated feature set.
Associated data typeStrength (# associated data)Lineage of highest associated data
RNA
RNA11,522THYM (6766)view →
Protein (mass-spec)6,665LSCC (1619)view →