RNU2-39P

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RNU2-39P RNA expression is significantly associated with the protein abundance of many other proteins, with 4,148 significant associations in total. CCRCC shows the largest number of these associations.

The most reproducible RNU2-39P-associated proteins across cancer lineages are PRAM1_S334, ATP6V1C1, and BCL6_S330. Each is linked with RNU2-39P in more than 2 cancer types. Because this analysis shows association rather than direction, both RNU2-39P-to-partner and partner-to-RNU2-39P results are reported.

Each partner links to its own Q-omics profile.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (RNU2-39P→partner) and Y-score (partner→RNU2-39P) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LSCCPRAM1_S334 →-0.679-0.477<.001<.00133
CCRCCATP6V1C1 →-0.144-0.255.004.00632
PDACBCL6_S330 →-0.501-0.756.003<.00132
LSCCC15orf48 →-0.485-0.373<.001.00232
CCRCCC1orf162_S112 →-0.609-0.384.001.00232
LSCCCACNA2D1 →+0.533+0.535.001.00232
Each partner links to its Q-omics profile. Showing the 6 strongest of 4,148 associations by consensus.

Exploration