RNU1-48P

Across TCGA patient cohorts, RNU1-48P RNA expression is significantly associated with the mutation status of many other genes, with 510 significant associations in total. STAD shows the largest number of these associations.

The most reproducible RNU1-48P-associated genes across cancer lineages are PCDH1, CNTRL, and KCNJ15. Each is linked with RNU1-48P in more than 2 cancer types. Because this analysis shows association rather than direction, both RNU1-48P-to-partner and partner-to-RNU1-48P results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, PCDH1 grouped by RNU1-48P-low versus RNU1-48P-high in ESCA.

RNA expression associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (RNU1-48P→partner) and Y-score (partner→RNU1-48P) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
ESCA	PCDH1 →	+4.700	+0.149	.004	<.001	3	3
LGG	CNTRL →	+7.977	+0.238	.007	<.001	3	3
STAD	KCNJ15 →	+4.012	+0.073	.009	<.001	3	3
STAD	ELAPOR2 →	+4.275	+0.151	.007	<.001	3	3
ESCA	BPIFB4 →	+6.285	+0.194	.001	<.001	3	2
LUAD	C7orf25 →	+7.930	+0.199	.008	<.001	3	2

Each partner links to its Q-omics profile. Showing the 6 strongest of 510 associations by consensus.

PCDH1 by RNU1-48P expression — ESCA

Explore this box plot interactively →