RNF40

Across TCGA patient cohorts, RNF40 RNA expression is significantly associated with the protein abundance of many other proteins, with 11,296 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible RNF40-associated proteins across cancer lineages are CD2BP2, DCTPP1, and SETD1A. Each is linked with RNF40 in more than 5 cancer types. Because this analysis shows association rather than direction, both RNF40-to-partner and partner-to-RNF40 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, RNF40 versus CD2BP2 in BRCA, with a Pearson correlation of 0.43.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (RNF40→partner) and Y-score (partner→RNF40) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner protein	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
BRCA	CD2BP2 →	+0.286	+0.716	<.001	<.001	3	6
BRCA	DCTPP1 →	+0.517	+0.659	<.001	<.001	3	5
BRCA	SETD1A →	+0.204	+0.881	<.001	<.001	3	4
LSCC	SH3KBP1 →	-0.401	-0.382	<.001	<.001	3	4
GBM	HSP90B1 →	-0.411	-0.281	<.001	<.001	3	4
GBM	HSPA5 →	-0.347	-0.261	<.001	.001	3	4

Each partner links to its Q-omics profile. Showing the 6 strongest of 11,296 associations by consensus.

RNF40 vs CD2BP2 — BRCA

Explore this scatter interactively →