RNF216-IT1

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RNF216-IT1 RNA expression is significantly associated with the protein abundance of many other proteins, with 7,081 significant associations in total. HNSC shows the largest number of these associations.

The most reproducible RNF216-IT1-associated proteins across cancer lineages are KBTBD2, KIAA1522, and MAP1B. Each is linked with RNF216-IT1 in more than 2 cancer types. Because this analysis shows association rather than direction, both RNF216-IT1-to-partner and partner-to-RNF216-IT1 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, RNF216-IT1 versus KBTBD2 in LUAD, with a Pearson correlation of 0.36.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (RNF216-IT1→partner) and Y-score (partner→RNF216-IT1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LUADKBTBD2 →+0.241+0.542<.001.00133
LSCCKIAA1522 →-0.396-0.734<.001<.00133
LSCCMAP1B →+0.556+0.405.002.00133
LSCCMAP1B_S1438 →+0.631+0.389.002.00233
LSCCMAP1B_S1620 →+0.795+0.520.007.00833
LSCCMAP1B_S1625 →+0.676+0.430.003.00133
Each partner links to its Q-omics profile. Showing the 6 strongest of 7,081 associations by consensus.

RNF216-IT1 vs KBTBD2 — LUAD

Per-sample scatter of RNF216-IT1 vs KBTBD2 in LUAD (Pearson r = 0.36).

Explore this scatter interactively →

Exploration