RNF215

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RNF215 mutation is significantly associated with the RNA expression of many other genes, with 2,314 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible RNF215-associated genes across cancer lineages are RNU6-589P, RN7SKP169, and DNAJA1P1. Each is linked with RNF215 in more than 1 cancer types. Because this analysis shows association rather than direction, both RNF215-to-partner and partner-to-RNF215 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, RNU6-589P grouped by RNF215-low versus RNF215-high in CESC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (RNF215→partner) and Y-score (partner→RNF215) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
CESCRNU6-589P →+0.413+4.705<.001.00332
SKCMRN7SKP169 →+0.164+6.469<.001.00132
BLCADNAJA1P1 →+0.026+4.497.004.00932
BLCAHMGN1P34 →+0.105+5.018<.001.00432
UCECWDR7-OT1 →+0.066+2.179.005.00732
UCECRNU6-907P →+0.235+2.622.007.00732
Each partner links to its Q-omics profile. Showing the 6 strongest of 2,314 associations by consensus.

RNU6-589P by RNF215 expression — CESC

Box plot of RNU6-589P in RNF215-low vs RNF215-high samples in CESC.

Explore this box plot interactively →

Exploration