RNF19B

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RNF19B RNA expression is significantly associated with the protein abundance of many other proteins, with 10,419 significant associations in total. PDAC shows the largest number of these associations.

The most reproducible RNF19B-associated proteins across cancer lineages are PTPN6, PARP14, and OXR1. Each is linked with RNF19B in more than 5 cancer types. Because this analysis shows association rather than direction, both RNF19B-to-partner and partner-to-RNF19B results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, RNF19B versus PTPN6 in GBM, with a Pearson correlation of 0.45.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (RNF19B→partner) and Y-score (partner→RNF19B) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
GBMPTPN6 →+0.577+0.415<.001<.00136
COADPARP14 →+0.473+0.716<.001<.00136
BRCAOXR1 →-0.449-0.590<.001<.00135
HNSCMX2 →+0.738+0.419<.001.00135
COADNADK →+0.445+0.708<.001<.00135
GBMOAS2 →+0.816+0.388<.001<.00135
Each partner links to its Q-omics profile. Showing the 6 strongest of 10,419 associations by consensus.

RNF19B vs PTPN6 — GBM

Per-sample scatter of RNF19B vs PTPN6 in GBM (Pearson r = 0.45).

Explore this scatter interactively →

Exploration