RNF19B

RNA expression — cross-omics
Cross-omicsRNA → FUNCTION-RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, RNF19B RNA expression is significantly associated with the go_rna of many other GO terms, with 3,894 significant associations in total. BREAST shows the largest number of these associations.

The most reproducible RNF19B-associated GO terms across cancer lineages are Cellular response to nutrient levels, Cellular response to starvation, and Regulation of plasma membrane repair. Each is linked with RNF19B in more than 11 cancer types. Because this analysis shows association rather than direction, both RNF19B-to-partner and partner-to-RNF19B results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Cellular response to nutrient levels grouped by RNF19B-low versus RNF19B-high in STOMACH.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (RNF19B→partner) and Y-score (partner→RNF19B) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner GO termX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
STOMACHCellular response to nutrient levels →+0.064+1.282.007.002212
BREASTCellular response to starvation →+0.057+1.151<.001<.001310
SOFT_TISSUERegulation of plasma membrane repair →+0.227+0.662<.001.001310
SKINPhospholipid biosynthetic process →+0.038+0.848<.001<.001310
BREASTResponse to starvation →+0.050+0.974<.001<.001310
OVARYPositive regulation of ubiquitin-dependent protein catabolic process →+0.057+0.653.003.00939
Each partner links to its Q-omics profile. Showing the 6 strongest of 3,894 associations by consensus.

Cellular response to nutrient levels by RNF19B expression — STOMACH

Box plot of Cellular response to nutrient levels in RNF19B-low vs RNF19B-high samples in STOMACH.

Explore this box plot interactively →

Exploration